If you’ve ever wished for a nostalgic treat that doesn’t derail your healthy lifestyle, then you’re going to adore this recipe. These Healthy Homemade Twinkies (High-Protein + Gluten-Free) are a delightful reinvention of the classic childhood snack. They bring together light, fluffy cake with a creamy strawberry protein filling, all without the gluten or excessive sugar. Trust me, this version is just as fun, a whole lot better for you, and perfect for satisfying those sweet cravings with a nutritious twist.
Ingredients You’ll Need
Gathering the right ingredients is key, and luckily, this recipe keeps it simple while packing in flavor, moisture, and texture. Each element works harmoniously to create that fluffy outside and creamy center that make these twinkies irresistible.
- Coconut flour: Adds a tender crumb while keeping the recipe gluten-free and high in fiber.
- Gluten-free baking powder: Ensures your twinkies rise beautifully without any gluten concerns.
- Salt: Enhances all the subtle sweetness and balances the flavors.
- Honey: A natural sweetener that adds just the right amount of golden sweetness.
- Unsweetened applesauce: Keeps the batter moist and adds natural sweetness without fat.
- Plain Greek yogurt (2-4%): Boosts protein content while lending creaminess to the batter.
- Unsweetened vanilla almond milk: Keeps the batter light and dairy-friendly with a hint of vanilla flavor.
- Vanilla extract: Provides a warm, inviting aroma and deepens flavor complexity.
- Whole eggs: Bind everything together and add richness and structure.
- Egg whites: Whipped to give the batter airiness for that soft, spongy texture.
- Rainbow sprinkles: Bring that nostalgic fun of colorful confetti right into your healthy treat.
- Light strawberry cream cheese: Adds a luscious, tangy sweetness for the filling without heaviness.
How to Make Healthy Homemade Twinkies (High-Protein + Gluten-Free)
Step 1: Prep and Mix Your Dry Ingredients
Start by preheating your oven to 350°F and lightly greasing your Twinkie silicon pans with cooking spray to prevent sticking. In a medium bowl, whisk together coconut flour, gluten-free baking powder, and salt. This combination lays the foundation, ensuring your Twinkies have the perfect rise and tender crumb.
Step 2: Combine Wet Ingredients Separately
In a separate bowl, blend the honey, unsweetened applesauce, vanilla almond milk, plain Greek yogurt, whole eggs, and vanilla extract until smooth. This mixture brings moisture, sweetness, and tenderizing properties that promise a flavorful cake experience.
Step 3: Whip the Egg Whites
For that classic light, fluffy texture reminiscent of the original Twinkie, beat the egg whites in a clean bowl until soft peaks form. This aeration is what gives your twinkies their signature bounce.
Step 4: Combine Everything Carefully
Pour the wet mixture into the bowl containing the dry ingredients and stir gently until just combined. Next, fold in about half of the whipped egg whites to lighten the batter, then gently fold in the rest along with one teaspoon of rainbow sprinkles. This keeps the batter airy and colorful, setting the stage for a fun visual surprise.
Step 5: Bake and Finish the Twinkies
Sprinkle the remaining sprinkles evenly along the bottom of each Twinkie mold for extra festive flair, then fill the molds about two-thirds full with batter. Bake on a baking sheet for 30 minutes. Afterward, carefully unmold your Twinkies onto the baking sheet, rounded side up, and bake for another 7 to 10 minutes until just lightly golden brown. This step ensures a tender crust with a little golden finish.
Step 6: Prepare and Pipe the Strawberry Protein Filling
While the Twinkies cool, mix plain Greek yogurt, light strawberry cream cheese, and the last bit of rainbow sprinkles until smooth and creamy. Transfer the filling to a piping bag with a star tip, then carefully insert the tip into the bottom of each Twinkie and fill generously. This creamy filling is what truly elevates these treats, making them a healthy indulgence.
How to Serve Healthy Homemade Twinkies (High-Protein + Gluten-Free)

Garnishes
Adding a dusting of powdered erythritol or extra rainbow sprinkles on top adds that charming, inviting look and a bit of extra sweetness without going overboard. Fresh strawberries sliced alongside the Twinkies enhance the natural strawberry flavor in the filling.
Side Dishes
Pair these Twinkies with a hot cup of herbal tea or a creamy latte for an afternoon pick-me-up. For a more substantial snack, a handful of mixed nuts or a small fruit salad complements the protein-packed nature of this dessert perfectly.
Creative Ways to Present
Try arranging your twinkies in a fun tiered dessert tray or individual clear cups layered with fresh berries and extra cream filling for a delightful twist at parties. You can also drizzle a bit of melted dark chocolate over the top for an elegant finish that stays true to your healthier approach.
Make Ahead and Storage
Storing Leftovers
Once your Healthy Homemade Twinkies (High-Protein + Gluten-Free) have cooled completely, store them in an airtight container in the refrigerator for up to 3 days. This keeps the filling fresh and the cake moist without drying out.
Freezing
If you want to enjoy these later, freeze the Twinkies without the filling in a single layer on a baking sheet first, then transfer to a freezer-safe container. They’ll keep well frozen for up to 2 months. Fill with the creamy strawberry mixture after thawing.
Reheating
Gently warm refrigerated Twinkies in the microwave for 10-15 seconds if you prefer them slightly warm. Avoid too much heat, as the filling may soften excessively. For frozen Twinkies, thaw in the fridge overnight before serving and filling.
FAQs
Can I make these Twinkies dairy-free?
Absolutely! Substitute the Greek yogurt with a coconut yogurt alternative and use a dairy-free cream cheese for the filling. This maintains the creamy texture while keeping the recipe friendly for dairy-free diets.
What if I don’t have coconut flour?
Coconut flour is key for the texture here, but if unavailable, you can try almond flour. However, almond flour is denser and may require tweaking the liquid ratios. Coconut flour’s high fiber absorbs moisture uniquely, so adjustments will be necessary.
Are these Twinkies truly gluten-free?
Yes! The recipe uses gluten-free baking powder and coconut flour, both naturally gluten-free ingredients, so these Twinkies are safe for those avoiding gluten or with celiac disease.
Can I use a different protein flavor for the filling?
Feel free to experiment with other fruit-flavored light cream cheeses or protein powders. Vanilla or lemon flavors also complement the cake wonderfully and give you room to customize the taste.
How do I get the best texture for these Twinkies?
Pay attention to folding in the egg whites gently to keep the batter light and airy. Overmixing can deflate the batter and lead to denser Twinkies. Also, make sure not to overbake to maintain that soft, spongy texture.
Final Thoughts
I can’t recommend these Healthy Homemade Twinkies (High-Protein + Gluten-Free) enough! They’re a perfect way to indulge childhood memories while staying true to your health goals. Whether you’re treating yourself or sharing with friends, they promise smiles with every bite. Give this recipe a try and watch it become your new favorite, guilt-free dessert staple.
Healthy Homemade Twinkies (High-Protein + Gluten-Free)
- Prep Time: 15 minutes
- Cook Time: 40 minutes
- Total Time: 55 minutes
- Yield: 18 twinkies 1x
- Category: Dessert
- Method: Baking
- Cuisine: American
- Diet: Gluten Free
Description
These Homemade Twinkies with Strawberry Protein Cream Filling are a delicious, healthier twist on the classic childhood treat. Made with coconut flour, Greek yogurt, and a light strawberry cream cheese filling, these treats are gluten-free, high in protein, and colorful with rainbow sprinkles – perfect for a fun dessert that satisfies your sweet tooth without the guilt.
Ingredients
Batter
- 1 cup coconut flour
- 2 tsp gluten free baking powder
- 1/8 tsp salt
- 1/4 cup honey
- 3/4 cup unsweetened apple sauce
- 1/2 cup plain 2-4% Greek yogurt
- 1/2 cup plus 2 tbsp unsweetened vanilla almond milk
- 2 tsp vanilla extract
- 3 whole eggs
- 4 egg whites
- 2 tsp rainbow sprinkles
Filling
- 1/2 cup plain 2-4% Greek yogurt
- 6 tbsp light strawberry cream cheese
- 2 tsp rainbow sprinkles
Instructions
- Prepare Oven and Pans: Preheat your oven to 350°F (175°C). Lightly spritz two silicone twinkie pans with cooking spray and place them on baking sheets to provide stability during baking.
- Mix Dry Ingredients: In a medium mixing bowl, whisk together the coconut flour, gluten free baking powder, and salt until evenly combined.
- Mix Wet Ingredients: In a separate bowl, combine the honey, unsweetened apple sauce, unsweetened vanilla almond milk, plain Greek yogurt, whole eggs, and vanilla extract. Stir well to blend.
- Beat Egg Whites: In another bowl, beat the egg whites with a mixer until they reach soft peak consistency, meaning they hold shape but still have a gentle curve when the beaters are lifted.
- Combine Batter: Pour the wet ingredients into the dry ingredients and stir until just mixed. Gently fold in about half of the whipped egg whites to lighten the batter; then fold in the remainder of the egg whites along with 1 teaspoon of the rainbow sprinkles to maintain a fluffy texture.
- Fill Twinkie Molds: Sprinkle the remaining rainbow sprinkles onto the bottom of the twinkie molds. Fill each mold about two-thirds full with the batter, ensuring an even distribution for consistent baking.
- Bake First Phase: Bake the filled twinkie molds for 30 minutes in the preheated oven.
- Unmold and Bake Again: Remove the pans from the oven, grease baking sheets to prevent sticking, and carefully remove the twinkies from the molds. Place the twinkies rounded side up on the prepared baking sheets. Return to the oven and bake for an additional 7 to 10 minutes until they turn lightly golden brown. Remove and let them cool completely.
- Prepare Filling: While the twinkies cool, mix together the plain Greek yogurt, light strawberry cream cheese, and 2 teaspoons of rainbow sprinkles. Transfer this mixture to a piping bag fitted with a star tip for easy filling.
- Fill Twinkies: Once the twinkies have fully cooled, carefully insert the piping tip into the bottom of each twinkie in several spots and pipe in the strawberry cream cheese filling evenly. Serve and enjoy your high-protein, gluten-free homemade twinkies!
Notes
- To keep the whipped egg whites fluffy, fold gently to avoid deflating the batter.
- Use silicone twinkie pans for easy unmolding; if not available, mini loaf pans can be substituted.
- Ensure twinkies are completely cool before filling to prevent melting the cream cheese filling.
- Store leftover twinkies in an airtight container in the refrigerator for up to 3 days.
- For a dairy-free version, substitute Greek yogurt and cream cheese with plant-based alternatives.

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